Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GPAGCQDDVVALNEACYQYVQKGAPTVPPSQECCDAVKSVDVPCVCSYLGSPGVRDNISMEKVFYVSQQCGVSIPGNCGGSMV
1L6H Chain:A ((2-69))
---GCNAG--QL-TVCTGAIAGGA---RPTAACCSSLRAQQ-GCFCQFAKDPRYGRYVNSPNARKAVSSCGIALP-TCH----
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30262 for 511 contacts (-59.2/contact) +
2D Compatibility (PS) -7194 + (NN) -4411 + (LL) 460
1D Compatibility (HY) -3200 + (ID) 800
Total energy: -45407.0 ( -88.86 by residue)
QMean score : 0.255
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: