Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LTCGQVQSRMTPCLPYLTGSG-PLGRCCGGVKGLLGAAKTPADRKTVCSCLKSAAGSIGGINVRKAAGLPNMCGVNIPYQISPSTDCTKVQ
2ALG Chain:A ((2-92))
ITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVSIPYKISASTNCATVK
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61372 for 620 contacts (-99.0/contact) +
2D Compatibility (PS) -9254 + (NN) -3587 + (LL) 0
1D Compatibility (HY) -8000 + (ID) 2100
Total energy: -84313.0 ( -135.99 by residue)
QMean score : 0.351
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: