Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------------------------------------------QQIQDFIDCLNVIIYFSSCIGYIDGHVREPTWGC---CMGVHELNRLVK-----------QDRDAQKICQCIELIAAVD----DPPFVLANIDALPSKCQTHLSFPISVKKNCSEVQ-------- |
1QPO Chain:A ((116-284)) | IATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAA-------GSVVDALRAVR--NAAPDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDY---LAVGALTHSVRVLDIGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28321 for 451 contacts (-62.8/contact) +
2D Compatibility (PS) -8603 + (NN) 1582 + (LL) 372
1D Compatibility (HY) -800 + (ID) 450
Total energy: -36220.0 ( -80.31 by residue)
QMean score : 0.372
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