Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ALTCGQVTSSLFSCLPYLRNTG--PLGDCCSGVKKLKGQAQTTADRQTACNCLKSTAGSIKGLNFGKAASLPSTCSVNIPYEISPSTDCSKVQ
1AFH Chain:A ((1-93))
AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49861 for 749 contacts (-66.6/contact) +
2D Compatibility (PS) -8988 + (NN) -24 + (LL) 0
1D Compatibility (HY) -8000 + (ID) 2600
Total energy: -69473.0 ( -92.75 by residue)
QMean score : 0.377
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: