Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATICNIDTSKLAECLPAVSGRSPPPPTKACCTALLSA--------DLH--CLCNYKSALPAF-GINPALAMALPKKCGGSLP----PNCKVDAEP
1SIY Chain:A ((2-90))
--TCGQVQGNLAQCIGFLQKG--GVVPPSCCTGVKNILNSSRTTADRRAVCSCL-KAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNSI-
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27403 for 503 contacts (-54.5/contact) +
2D Compatibility (PS) -7803 + (NN) -6204 + (LL) -20
1D Compatibility (HY) -2800 + (ID) 1250
Total energy: -45480.0 ( -90.42 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: