Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSICNVSISGLTSCSPAVTPPNPAPPTSACCSALSHAD----------LRCLCSYKNSTLLPSLGIDQKLPLKLPEKCRLPHRAPC
1BWO Chain:A ((2-79))
--DCGHVDSLVRPCLSYVQGG--PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGI--HNLNEDNARSIPPKCGVNLPY--
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20391 for 438 contacts (-46.6/contact) +
2D Compatibility (PS) -6782 + (NN) -5782 + (LL) -380
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -35535.0 ( -81.13 by residue)
QMean score : 0.234
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: