Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCGQVQSSLVACIPYLRSGGS-PTQACCNGVKSLNNAAKTTADRQAACECLKTAAGSISGLSPANAASLPGKCGVNVPYKISTSTNCKNVK
1AFH Chain:A ((1-93))
AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54292 for 757 contacts (-71.7/contact) +
2D Compatibility (PS) -9578 + (NN) -2539 + (LL) 0
1D Compatibility (HY) -8800 + (ID) 2950
Total energy: -78159.0 ( -103.25 by residue)
QMean score : 0.578
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: