Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QPQQSCTASLTGLNVCAPFLVPGSPTASTECCNAVQSINH----------DCMCNTMR------------IAAQIPAQCNLPPLSCSAN
1T12 Chain:A ((3-75))
----TCGQVTSNLAPCLAYLRNTG--PLGRCCGGVKALVNSARTTEDRQIACTC--LKSAAGAISGINLGKAAGLPSTCGV--------
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42428 for 312 contacts (-136.0/contact) +
2D Compatibility (PS) -5102 + (NN) -2308 + (LL) 64
1D Compatibility (HY) -4000 + (ID) 650
Total energy: -54424.0 ( -174.44 by residue)
QMean score : 0.334
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: