Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QNCSAAI--GELMTCGPYVL----PGN-NG----APS-------EQCCSALRAV--NHGCLCETIN---------------------IISSLPDHCSLPAVN-CAS
1W2Q Chain:A ((14-118))
SSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAPQRCD-
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40936 for 331 contacts (-123.7/contact) +
2D Compatibility (PS) -6648 + (NN) -1590 + (LL) -28
1D Compatibility (HY) -6000 + (ID) 850
Total energy: -56052.0 ( -169.34 by residue)
QMean score : 0.409
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: