Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQCLDNLSNMQVCAPLVLPGAVNPAPNSNCCIALQATNKDCICNALR-----------AATTFTTSCNLPSLDC
1L6H Chain:A ((2-68))
-GCNAG--QLTVCTGAIAGGA---RPTAACCSSLRAQ-QGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALPTC
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36013 for 402 contacts (-89.6/contact) +
2D Compatibility (PS) -5685 + (NN) -2554 + (LL) 160
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -47692.0 ( -118.64 by residue)
QMean score : 0.309
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: