Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QECGNDLS--NVQVCAAMVLP----GS-G-----RP-----------NSECCAALQSTNRDCLCNALR----------------------AATSLPSLCNLPPVDCGINT
1PSY Chain:A ((16-120))
QQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQVRDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGV---RCMR--
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20349 for 420 contacts (-48.5/contact) +
2D Compatibility (PS) -6628 + (NN) -5421 + (LL) -116
1D Compatibility (HY) -4400 + (ID) 750
Total energy: -37664.0 ( -89.68 by residue)
QMean score : 0.431
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: