Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QDPITPGPTIADCSPRLVALMPCAPFVQGTAQMPAQSCCDNLNQLYTLQP-------GCLCLLLNDTTLSDF-PINRTRALQLPVLCKLQAN----A-SACSEID
1T12 Chain:A ((3-90))
-----------TCGQVTSNLAPCLAYLRNTG--PLGRCCGGVKALVNSARTTEDRQIACTC--LKSAA-GAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKV-
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43607 for 516 contacts (-84.5/contact) +
2D Compatibility (PS) -7390 + (NN) -1345 + (LL) 888
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -57254.0 ( -110.96 by residue)
QMean score : 0.357
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: