Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSAAECKQERKILVNACKAVITR-KPPTPYCCERLRVTHVSCVCPVIT-PQLAALIDVNYAIKVIQGCGIQVPRHSKCGSITTP
1L6H Chain:A ((8-69))
-------------LTVCTGAIAGGARPTAACCSSLRAQ-QGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALP---TCH-----
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41453 for 410 contacts (-101.1/contact) +
2D Compatibility (PS) -5817 + (NN) 1069 + (LL) 1672
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -49029.0 ( -119.58 by residue)
QMean score : 0.156
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: