Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------------YGPC-----GKHNIEKEAEKLAPCTKA-----AQDL--KAPVSKSCCTVMEKKLKNPGCLCAIMLSHTAKNAGVKPEVAVTIPKRCNIPV-----------RPV--G-----HKCGAFPLV---------------------------------------- |
1EFP Chain:A ((1-183)) | AVLLLGEVTNGALNRDATAKAVAAVKALGDVTVLCAG-ASAKAAAEEAAKIAGVAKVLVAEDALYGHRLAEPTAALIVGLAGDYS---HIAAPATTDAKNVMPRVAALL-DVMVLSDVSAILDADTFERPIYAGNAIQVVKSKDAKKVFTIRTASFDAAGEGGTAPVTETAAAADPGLSSWVADEVAE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EFP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21840 for 479 contacts (-45.6/contact) +
2D Compatibility (PS) -9063 + (NN) 751 + (LL) 212
1D Compatibility (HY) -400 + (ID) 900
Total energy: -31240.0 ( -65.22 by residue)
QMean score : 0.401
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