Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------YGPC-----GKHDIEKEAEKLAPCTKA-----AQYL--EAPVSKRCCTVMEKKLKNPDCLCAIMFSHTARSAGVNPEVAVTIPKRCNIPV-----------RPV--G-----HKCGAFPLV---------------------------------------- |
| 1EFP Chain:A ((1-183)) | AVLLLGEVTNGALNRDATAKAVAAVKALGDVTVLCAG-ASAKAAAEEAAKIAGVAKVLVAEDALYGHRLAEPTAALIVGLAGDYS---HIAAPATTDAKNVMPRVAALL-DVMVLSDVSAILDADTFERPIYAGNAIQVVKSKDAKKVFTIRTASFDAAGEGGTAPVTETAAAADPGLSSWVADEVAE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EFP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28139 for 479 contacts (-58.7/contact) +
2D Compatibility (PS) -9162 + (NN) 460 + (LL) 212
1D Compatibility (HY) 0 + (ID) 850
Total energy: -37479.0 ( -78.24 by residue)
QMean score : 0.352
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