Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSCPQTI-TFSPCLTNVGNTGTPPAYDSQCCKLVRDPKW--------TDQCLCAVVSSH-FPGVDETKALNLAHDCGRRVP----KGIYCDGRPVPP
1BWO Chain:A ((2-88))
-DCGHVDSLVRPCLSYVQGG-PGP--SGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCS------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10581 for 462 contacts (-22.9/contact) +
2D Compatibility (PS) -7710 + (NN) -4427 + (LL) -116
1D Compatibility (HY) -3600 + (ID) 950
Total energy: -27384.0 ( -59.27 by residue)
QMean score : 0.337
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: