Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATAQCRSLTEYSPCLDAVTTGAEPTDQCCETLAGVMSMD-----DGLACLCDALTSDAASSL-GIRTSDAVQLPSKCQAKTGLTYT--HGYNCKGATVP
2ALG Chain:A ((6-89))
-----QVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC---LKQLSASVPGVNPNNAAALPGKCGVSI--PYKISASTNCA-----
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17874 for 492 contacts (-36.3/contact) +
2D Compatibility (PS) -7820 + (NN) -2404 + (LL) 840
1D Compatibility (HY) -4400 + (ID) 1000
Total energy: -32658.0 ( -66.38 by residue)
QMean score : 0.371
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: