Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QAQCGGRNLSILAPCLPAAKANVQPSAACCRALSSFATNTGEDCLCAAASSQQQ------S----G--AK--VEFAKYIPQKCQLTYKAGIVCNGVVIPGGQ
1HSS Chain:A ((38-103))
-------------------------LRDCCQQLA----HISEWCRCGALYSMLDSMYKEH-GAFPRCRREVVKLTAASITAVCRLPI---------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13123 for 220 contacts (-59.6/contact) +
2D Compatibility (PS) -4884 + (NN) -4601 + (LL) 2060
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -23148.0 ( -105.22 by residue)
QMean score : 0.330
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: