Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GSDCQNDIQMLETTCYKYVAKDAPTSPPSQECCDTMNGVDVPCVCSYLGAPGIKENISMEKVFYVAQQCGVSIPGNCGGSKRA
1L6H Chain:A ((2-69))
--GCNAG--QL-TVCTGAIAGGA---RPTAACCSSLRAQ-QGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALP--TCH----
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46077 for 511 contacts (-90.2/contact) +
2D Compatibility (PS) -6988 + (NN) -2701 + (LL) 64
1D Compatibility (HY) -1600 + (ID) 750
Total energy: -58052.0 ( -113.60 by residue)
QMean score : 0.215
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: