Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AECKNNIADLLPCQAAAQSETSTPSTECCTAVGKFKD--------DPACLCSTIAAAQAAGF-TIDAPVAATIPKRCKLDGYPTSCSKSK
1SIY Chain:A ((2-78))
-TCGQVQGNLAQCIGFLQKG-GVVPPSCCTGVKNILNSSRTTADRRAVCSC--LKA-AAGAVRGINPNNAEALPGKCGVNIP--------
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23652 for 483 contacts (-49.0/contact) +
2D Compatibility (PS) -7119 + (NN) -3059 + (LL) 376
1D Compatibility (HY) -4000 + (ID) 800
Total energy: -38254.0 ( -79.20 by residue)
QMean score : 0.248
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: