Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
YCKESLHLCMQHLKLNDRPTWLKCCDRLIIPGPCMCKYIKDPVQ-----WKEAYRLMASCGKTVPLNQSLKSYFKCG
1L6H Chain:A ((7-66))
----QLTVCTGAIAGGARPT-AACCSSLRAQQGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALP------------
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13140 for 366 contacts (-35.9/contact) +
2D Compatibility (PS) -5535 + (NN) -2075 + (LL) 1044
1D Compatibility (HY) -1600 + (ID) 900
Total energy: -22206.0 ( -60.67 by residue)
QMean score : 0.193
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: