Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IPICNIETNDLVKCHPAFTGXNNPPPPGPDCCALVRAANLQCLCP-YKPYLSR------FG-----IDPSKVRPLLTRCGVNTPPSCF
1SM7 Chain:A ((44-105))
--------------------------LREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQIGTCP
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32259 for 279 contacts (-115.6/contact) +
2D Compatibility (PS) -4978 + (NN) 34 + (LL) 876
1D Compatibility (HY) -800 + (ID) 500
Total energy: -37627.0 ( -134.86 by residue)
QMean score : 0.370
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: