Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFLNTHPKKKEIVAEFNNEHYINESDLKTLEE-----G-KDLVDKINNINLIQQNEESEELNIGKVLA
1A1W Chain:A ((45-81))
------------LFSMLLEQNDLEPGHTELLRELLASLRRHDLLRRVDDFE------------------
General information:
TITO was launched using:
RESULT:
Template:
1A1W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11750 for 128 contacts (-91.8/contact) +
2D Compatibility (PS) -3362 + (NN) -1761 + (LL) 2228
1D Compatibility (HY) -2400 + (ID) 200
Total energy: -17245.0 ( -134.73 by residue)
QMean score : 0.625
(partial model without unconserved sides chains):
PDB file :
Tito_1A1W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A1W-query.scw
PDB file :
Tito_Scwrl_1A1W.pdb
: