Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLQRNFLIWLLASLFYAYQYILRVIPNIIAPELITKFNISIADIGQFGGLYYIGYTFAHIPVGFALDRFGPKFVLPICVVLTFVGTLPLIYFDEWYYLTFSRIIVGVGSSASAIGIFKIASTYFSQKKSAKMASLSIIVGLLGAIYGGLPLNFLFNKFGWDYVIYAFSTFGCLLALLLFFITPNNSTEKNVSGNVFQDLKTVLFNKHIILISFFSGLMVGPLEGFADGWAKAFLCEVYQMTGDLASLLSSLIFIGMGAGSFFLAYFLERHPN-RHYEAII--ACSLAMIASFLLLFAQAGGLYVVLPTLLIIG------FASGYQVIAIYKAISYVDNSLVGLTTAVSNMIIMVFGYFFHTGIAKIVDLCWDRTVIQGNPVYGSELLIKAISIIPICLLLAVFWFVWLKKRS |
3J5R Chain:B ((335-433)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIIFTAAAYYRPVEGLPPYKLKNTVGDYFRVTGEILSVSGGVYFFFRG-----IQYFLQRRPSVDSYSEILFFVQSLFMLVSVVLYFSQRKEYVASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYLVFLFGFSTAVVTLIEDGKYNSLYSTCLELFKFTIGMGDLEFTENYDFKAVFIILLLAYVILT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J5R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43612 for 522 contacts (-83.5/contact) +
2D Compatibility (PS) -9760 + (NN) -5307 + (LL) 16612
1D Compatibility (HY) -10000 + (ID) 1200
Total energy: -53267.0 ( -102.04 by residue)
QMean score : 0.147
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