Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLQRNFLIWLLASLFYAYQYILRVIPNIIAPELITKFNISIADIGQFGGLYYIGYTFAHIPVGFALDRFGPKFVLPICVVLTFVGTLPLIYFDEWYYLTFSRIIVGVGSSASAIGIFKIASTYFSQKKSAKMASLSIIVGLLGAIYGGLPLNFLFNKFGWDYVIYAFSTFGCLLALLLFFITPNNSTEKNVSGNVFQDLKTVLFNKHIILISFFSGLMVGPLEGFADGWAKAFLCEVYQMTGDLASLLSSLIFIGMGAGSFFLAYFLERHPN-RHYEAII--ACSLAMIASFLLLFAQAGGLYVVLPTLLIIG------FASGYQVIAIYKAISYVDNSLVGLTTAVSNMIIMVFGYFFHTGIAKIVDLCWDRTVIQGNPVYGSELLIKAISIIPICLLLAVFWFVWLKKRS
3J5R Chain:B ((335-433))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIIFTAAAYYRPVEGLPPYKLKNTVGDYFRVTGEILSVSGGVYFFFRG-----IQYFLQRRPSVDSYSEILFFVQSLFMLVSVVLYFSQRKEYVASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYLVFLFGFSTAVVTLIEDGKYNSLYSTCLELFKFTIGMGDLEFTENYDFKAVFIILLLAYVILT


General information:
TITO was launched using:
RESULT:

Template: 3J5R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43612 for 522 contacts (-83.5/contact) +
2D Compatibility (PS) -9760 + (NN) -5307 + (LL) 16612
1D Compatibility (HY) -10000 + (ID) 1200
Total energy: -53267.0 ( -102.04 by residue)
QMean score : 0.147

(partial model without unconserved sides chains):
PDB file : Tito_3J5R.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3J5R-query.scw
PDB file : Tito_Scwrl_3J5R.pdb: