Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEIILAEPRGFCAGVKRAVDILAITLKKYRNKRKVYVLHEIVHNKYIVEDFKRQGVIFVNSIRDIKDNRGILIFSAHGVSKNIEDKAKRKGIQVIDATCPLVSKVHKEAKRYEDSGKELILIGHKNHPEVKGIRGRVNNP---IVLVQTLQNVRDLKVKNPDNLSYVTQTTLSTDDTREIITALKLRFPNITGPNLKDICYATQNRQNAVKKLTEIVDIVLIIGSKNSSNSNRLLDLCTARGKRAYLIDNYSYMDKSWLQGIEKIGITAGASAPDILVDELINHLKINVNTKVSVMSDGVTENVQFKIPHLV |
3KEM Chain:A ((11-315)) | MQILLANPRGFCAGVDRAISIVENALAIY--GAPIYVRHEVVHNRYVVDSLRERGAIFIEQISEVPDG-AILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEKLSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSSNSNRLAELAQRMGKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQ-QLGGGEAIPLEGREENIVFEVPKEL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3KEM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -187014 for 2635 contacts (-71.0/contact) +
2D Compatibility (PS) -33253 + (NN) -15794 + (LL) 324
1D Compatibility (HY) -29600 + (ID) 7550
Total energy: -272887.0 ( -103.56 by residue)
QMean score : 0.596
|
|
|