Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------------MKQYTFRIDNKDPLYKKLIKLP---TAYYRLKHDGNKHNIHSNNNVILEIGNNTNGVKLRWENDKIVLHKGSSALY--------
1L7Y Chain:A ((1-94))
MSGGTAATTAGSKVTFKITLTSDPKLPFKVLSVPESTPFTAVLKFAAEEFKVPAATSAII--TNDGVGVNPAQPAGNIFLKHGSELRLIPRDRVGH
General information:
TITO was launched using:
RESULT:
Template:
1L7Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5438 for 507 contacts (-10.7/contact) +
2D Compatibility (PS) -7726 + (NN) -3234 + (LL) 308
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -19940.0 ( -39.33 by residue)
QMean score : 0.159
(partial model without unconserved sides chains):
PDB file :
Tito_1L7Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L7Y-query.scw
PDB file :
Tito_Scwrl_1L7Y.pdb
: