Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNRIVIGISGASGSIYGMHILKALKGADCETHLVISRAGKTTIAHEITERLEDITSLADFYYSE--------------EKIGEKIASGSFKTSGMIVAPCSMKTMSEIASGVTSNLLTRAADVTLKERRKLVLIVRESPLHLGHLQNMLKLTEMGAIIAPPMPAFYTKPKSLEDIISHSISKVLSLFDIKLPDFKEWQGV
4RHF Chain:A ((8-205))
FNGKITLAITGASGASYAMRLIECLIAANYQLYILCSSAGRISLDTEVGVKIPSSPDAASKFLTEKYQAKDQQITVFGKEQWFSPVASGSSAPKQMVVCPCSTGTMAAICHGMSDNLIERAADVVIKERGQLILMVRETPFSTLHLQNMLSLSQQGVTIMPASPGFYHKVETIEDLIDFMVGRVLDHLGIEQDIMPRWG--
General information:
TITO was launched using:
RESULT:
Template:
4RHF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126809 for 1460 contacts (-86.9/contact) +
2D Compatibility (PS) -19535 + (NN) -6733 + (LL) -52
1D Compatibility (HY) -16400 + (ID) 3400
Total energy: -172929.0 ( -118.44 by residue)
QMean score : 0.464
(partial model without unconserved sides chains):
PDB file :
Tito_4RHF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RHF-query.scw
PDB file :
Tito_Scwrl_4RHF.pdb
: