Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRGIGTDIVYIPRILRILQKYGKKFLNKIYTEQEIEISRKYN-SQEMQAKYLAKRFAAKEAFVKALG-GFSHGIIMKDIEIYNDVRGKPHLTVSKNFIFKDHMIHLSLSDDGDCATAFVIICSSLP
1F80 Chain:A ((3-115))
---GIGLDITELKRIASMAGRQ-KRFAERILTRSELD--QYYELSEARKNEFLAGRFAAKEAFSKAFGTGIGRQLSFQDIEIRKDQNGKPYIICTK---LSQAAVHVSITHTKEYAAAQVVIERL--
General information:
TITO was launched using:
RESULT:
Template:
1F80.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75056 for 799 contacts (-93.9/contact) +
2D Compatibility (PS) -12338 + (NN) -3102 + (LL) 800
1D Compatibility (HY) -6800 + (ID) 2150
Total energy: -98646.0 ( -123.46 by residue)
QMean score : 0.417
(partial model without unconserved sides chains):
PDB file :
Tito_1F80.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F80-query.scw
PDB file :
Tito_Scwrl_1F80.pdb
: