Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMKRSIVFDALLILCISFFPIHANESCSNDGQFVENLMLADESTCHKSRKYNGREVISVKDKKLDFYVSANSGKIYSDNSETFVNGIKAIGERVPTLVESRYGTIIKNMVADEIESVKKFDDEIDFQWLNSISLGYYAG--ENGRIDFETM--YSKVNIKNGNSF-----PIFDRSAGIFAFLLNFYYNPSIQ-DTQIAPYVGLGIGPTVFRLRKINGSPQNSMPLNVPWFAYQVKLGVSYSIIPEIKTFLGYRYFSIPIPIADDISTHNIEIGLIFNF
3QQ2 Chain:A ((861-1010))
----------------------------------------------------------------------------------------------------------------------------TSGAAWSLEGGRRFELPNDWFAEPQAEVMLWRTSGKRYRASNGLRVKVDANTATLGRLGLRFGRRIALAGGNIVQPYARLGWTQEFKS------------------GRVELGAGVDAALGKGHNLYASYEYAAGDR----INIPWSFHAGYRYSF
General information:
TITO was launched using:
RESULT:
Template:
3QQ2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28686 for 711 contacts (-40.3/contact) +
2D Compatibility (PS) -12999 + (NN) -2078 + (LL) 9056
1D Compatibility (HY) 2800 + (ID) 800
Total energy: -32707.0 ( -46.00 by residue)
QMean score : 0.104
(partial model without unconserved sides chains):
PDB file :
Tito_3QQ2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QQ2-query.scw
PDB file :
Tito_Scwrl_3QQ2.pdb
: