Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQEVSNSFDEIKVFIEQKKEILKYIVSWLKEDKQENFLKEFEQIQID-FSEKAKRLTSLAMKKLKILTIADLNLAVISQNQYMKISYKSVISRNSVHIMLIKKNSDNSFAFYDPNLWCSF
4RR2 Chain:B ((120-161))
-------------FIQQEMDLLRFRFSILPKDKIQDFLKD-SQLQFEAISDEEKTLREQEIVASSPSLSGLKLGFESIYKIPFADALDLFRGRKVYLEDGFAYVPLKDIVAIILNEFRAK
General information:
TITO was launched using:
RESULT:
Template:
4RR2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1386 for 149 contacts (9.3/contact) +
2D Compatibility (PS) -4237 + (NN) -819 + (LL) 1240
1D Compatibility (HY) -5200 + (ID) 800
Total energy: -8430.0 ( -56.58 by residue)
QMean score : 0.592
(partial model without unconserved sides chains):
PDB file :
Tito_4RR2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RR2-query.scw
PDB file :
Tito_Scwrl_4RR2.pdb
: