Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKSIFTFSFFTAVSRISGLIRDILIAMVVGATSLADVFFSSFRFASL--FRAFFAERAFATSFVPLYSAESRDSKRAFNFASSVISITFIIVLNFCLIM--QTFFSYM-VQIFTPGFDQSKLALAVTLSRIM-MPYIIFASIASLIGGM-LQVKQHFASTAIAPIILNLCLIASLLVP----YIKTPAHNLSIAVLIGGMLQLLLMLFGAYKLKAFFFFSMKLSNEVKLFFKRVIPAIINSCVIQISLWIDTIMASFIPNAVSYIYYADRLNQLPQGVVGTAIGTVLLPLISKQANDTENTVKIQNRALNIGLMLIMPTTAAFIIIPNTILLTLFSYGKFDHYAVQQTAPTLIALSLSLPAFIINKVLLPTFFAKSNLKIPTIFSLACLGINVVLNLLLMNKYQHTGIAIATSISTWINSILLINYLTINKMYKANQVLLLNIAKILVATAVMSVALYVSSSLSAGLFFDRIFARVIYLAALVVLSAVIYFGTLYLMFMGDFKCTKL |
| 4NY2 Chain:A ((5-408)) | -PKGTIYLTFDDGPVNASVEVIKVLNQGGVKA----TFYFNAWHLDGIGDENEDRALEALKLALDSGHIVGNHSYDHMIHNCVEEFGPT---SGADCNATGNHQIHSYQDPVRDAASFEQNLITLEKYLPTIRSYPNYKGYELARLPYTNGWRVTKHFQADG-------LCATSDNLKPWEPGYVCDPA-NPSNSVKASIQVQNILANQG-YQTHGW---DVDWAPE---NWGIPMPANSLTEAVPFLAYVDKALNSCSPTTIEP--INSKTQEFPCGTPLHA-DKVIVLTHDFLFEDGKR---------GMGATQNLPKLAEFIRIAKEAG---YVFDTMDNYT---------------PRWSVGK---------------TYQAGEYVLYQGVVYKAVISHTAQQDWAPSSTSSLWTNADPATNW-TLNVSYEQGDIVNYKGKRYLVSVPHVSQQDWTPDTQNT-----------------------------------LFTALEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NY2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -338130 for 3317 contacts (-101.9/contact) +
2D Compatibility (PS) -39847 + (NN) 12640 + (LL) 11528
1D Compatibility (HY) 800 + (ID) 3700
Total energy: -356709.0 ( -107.54 by residue)
QMean score : 0.069
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