Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLGIEKRGITNALWKLQEADQREVLTLTQRFELPEILARTLAIRGVNIENAGNFLYPLIRSLLPDPFHLLDMDKAVFRIIQAINNDEN--IAIFGDYDVDGATSS-ALISRYLRAIGIHSIIYIPDRVDEGYGLNSNALLQLKKKGIDLCISV-------DCGTLAYQPIEDAKGFGLDVIVIDHHLGTEKLPSAIAVVNPNRLDESSPYNSLAAVGVSFLLTVALNKSLREQDFFAGKKEPDLFDLLDLVALGTVCDVMQITGLNRAFVSQGLKVMSARKNVGLRVLFDALGILERPNVSRLSFNIGPCINAGGRIGEALLGARLLSTDDKKEADSIALKLIDLNNARKMMENEALLEAIIQVEKSTQSGANFIMVSGNWHQGVIGIIASRLKEKFHLPTIVISLNNRIGKASCRSIPGVDIGAAVLSAKCMNLIIEGGGHSMAAGFLINEDKMSDLHDFLTERFAYSTNDKALKVDGIVTAKAINLSLWNQLQRLEPFGVGNPEPRFIIQGAKIRKPEIVGVDHIKCFIVDDDVMVRAIAFRSANTHLGSAIMEGNIEAILGKISMNYWNGNEFVQFLIEDVLTIS |
| 3DMD Chain:B ((119-218)) | -------------------------------------------------------------------------------LIEEIRKAEKPYVIMFVGFNGSGKTTTIAKLANWLKNHGFSVVIAASDT------FRAGAIEQLEEHAKRIGVKVIKHSYGADPAAVAYDAIQHAKARGIDVVLIDTAGRSETNRNLMDEMKKIARVTKPNLVIFVGDALAGNAIVEQARQFNEAVKIDGIILTKLDADARGGAALSISYVIDAPILFVGVGQGYDDLRPFEKEWFLERIFG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DMD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47368 for 596 contacts (-79.5/contact) +
2D Compatibility (PS) -9856 + (NN) -3596 + (LL) 26688
1D Compatibility (HY) -6800 + (ID) 1300
Total energy: -42232.0 ( -70.86 by residue)
QMean score : 0.344
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