Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTIPEKMINLCYNSADSVSVEYSDVIVVKNLDPEQLEQYKSSSKLEFTLKFQNGKVEYKNSKVTLTIPEQLKNCKANGKSLLGDINEHFKDTDNEVVECLVDKIADGLKSFI----INPEDLNVDGSSIINKDDDAPVQILDSTEYGGTTEEQLLIQGIVNNVVGTLAGIVEVPIGMATDWVWPQDQK |
3NJK Chain:A ((32-114)) | ---------------------------------------------------------------------------ANGQVCQGDITVTQAGT---ITYLLNDQTLKGLK-FVGVGFVTPFDGIIDAVTI--SSDGMLVQLVDLDKTPGTTKFQFVLSNTANTLLVLSPAPQIINRPQ----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NJK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 395 for 396 contacts (1.0/contact) +
2D Compatibility (PS) -8186 + (NN) -305 + (LL) 6056
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: -7340.0 ( -18.54 by residue)
QMean score : 0.174
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