Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSVIEITSIKRRFCAYLIDMAVLLIPNLLIIILLKNFPLILDLLYMCVNCSYFTYFISSAAQATPGQQLMNI-HTISLDGS-KINLSL-AFDRSISQFFLHLLNNVIAILIELFQEQNELVS--ALIILGVIMLLLTICWYLVACFSQEKQTYHDMLFDTIVVKGAIK |
| 1QYS Chain:A ((3-94)) | ---------------------------------------DIQVQVNIDDNGKNFDYTYTVTTESELQKVLNELMDYIKKQGAKRVRISITARTKKEAEKFAAILIKVFAEL--GYNDINVTFDGDTVTVEGQL------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QYS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44230 for 567 contacts (-78.0/contact) +
2D Compatibility (PS) -9012 + (NN) 140 + (LL) 8516
1D Compatibility (HY) 3600 + (ID) 350
Total energy: -41336.0 ( -72.90 by residue)
QMean score : 0.079
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