Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKFLEGLLIWLVIIVLISVAYIQFSGNIGKSKTTIPFSEFLTKLEDNDIENIVIKNQSIEGKFRDGSNFNSSGIIYSDLIKGLHDKKVKFSFSTGDSAMSIIGRLLIQWIPTFIFIGLLLFLLKQTQTGGNRTISFGKSKARLMTSGKKVTFDDVAGIDEAKEELVEIVDFLKQRQKFQVLGGKIPKGCLLIGSPGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFDQGKKNAPCIIFIDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESNEGVIIVAATNRPDVLDPALLRPGRFDRQITISLPDINGRERILNTHIK--KISIAPDVNVKTVARGTPGFSGADLANLVNESALIAARRNKKIVTMDDFEYARDKVMMGVERRSLMMTEEEKKLTAYHEAGHAIVAVNMSASDPIHKATIIPRGRALGLVMRLPETDRVSHTREKMIADITVAMGGRVAEELIFGYDKITSGASSDIKQASDLSRAMVTKWGMSDKIGPVYHNREQNVHSSDIISEDTLKLIDEEVKRVVSSCYEKAKDILTKRCKDLELIAENLLEFETLTGDEIKDILSGKKIVRNDNESKEKVRKSSL |
2QZ4 Chain:A ((3-256)) | ------------------------------------------------------------------------------------------------------------------------------------------------------VSFKDVAGMHEAKLEVREFVDYLKSPE------AKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGAEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEI------------------EQTLNQLLVEMDGMGTTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQERREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNEAALH--------VHTLNFEYAVERVLAGTAKK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QZ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136330 for 1742 contacts (-78.3/contact) +
2D Compatibility (PS) -24054 + (NN) -17643 + (LL) 26588
1D Compatibility (HY) -24000 + (ID) 5800
Total energy: -181239.0 ( -104.04 by residue)
QMean score : 0.480
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