Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSPISIKETNADQLPNEKGTRYKENKEYFYTSLKNEAIGVVITGLFITAAVMVPSVVGAVIYGIIAVLVVITTILHAIISTLSSYREMEENKVEHVNSQAIKI
3K3F Chain:A ((33-69))
---------------------------------------NTVTGLLFFAGIFYNSTTLG-VCAVLGTAASTLTAQLLGVDKPLVRAGLFGFNGTLAGIALPFF
General information:
TITO was launched using:
RESULT:
Template:
3K3F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22448 for 164 contacts (-136.9/contact) +
2D Compatibility (PS) -3636 + (NN) 366 + (LL) 2172
1D Compatibility (HY) 0 + (ID) 300
Total energy: -23846.0 ( -145.40 by residue)
QMean score : 0.170
(partial model without unconserved sides chains):
PDB file :
Tito_3K3F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K3F-query.scw
PDB file :
Tito_Scwrl_3K3F.pdb
: