Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSQKGVDLAKSKKDISKFETAS-SNQKKEWETDSKKKAEEIERLK-TLKKKSDEELQEARGKLAEQERLLKYPEAEKSKRCCSIIYCSTYRGTS
1X9B Chain:A ((4-49))
-------------SDRAKFESMINSPSKSVFVR----NLNELEALAVRLGKSYRIQLDQAKEKWKVK----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1X9B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 16697 for 251 contacts (66.5/contact) +
2D Compatibility (PS) -5057 + (NN) -2347 + (LL) 3148
1D Compatibility (HY) -2000 + (ID) 700
Total energy: 9741.0 ( 38.81 by residue)
QMean score : 0.533
(partial model without unconserved sides chains):
PDB file :
Tito_1X9B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X9B-query.scw
PDB file :
Tito_Scwrl_1X9B.pdb
: