Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSLYLRSHSLSKLNSSLFAVNNN-QNVEPRSDIS-------TGLFKLKNSVY----PPTFTMGSHLSNN----KILPLYCQNHGHDNMQYYNIIIWITTMLKA
2LZ0 Chain:A ((1-100))
GSH---EGEPVVGMDKSLFAGNTVIREITVQPNIGLLYDGMFSGCTALEKLILTGEDPSAYSAGDGLRDGADFLICVPEEALDRYRRDYFWQTYAAWIQPMEQ-
General information:
TITO was launched using:
RESULT:
Template:
2LZ0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9267 for 467 contacts (-19.8/contact) +
2D Compatibility (PS) -8708 + (NN) 2189 + (LL) 588
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -19598.0 ( -41.97 by residue)
QMean score : 0.140
(partial model without unconserved sides chains):
PDB file :
Tito_2LZ0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LZ0-query.scw
PDB file :
Tito_Scwrl_2LZ0.pdb
: