Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLPDKIIYEGKAKFIIETKDPLTVIQYFKDEVTAFNKEKYKIIEGKGTINNRISTFIMETLEKAGINTHFIKTLSEREQLVKKLKIIPLEIVVRNIAAGSFCKRFNIKEGEKLAFPIIEFFYKNDGLADPMVNENHVLYFGWLSYEEMEEIKTITIKINTVLIDLFLNAGIDLVDLKLEFGRPINDNTKITLADEISPDNCRLWDKNTHKKLDKDVFRLNLGNLKEAYLEVAKRLSVKLC |
4O7R Chain:A ((11-232)) | ----------KAKKMIPIDDDKLIME-FKDDATAFDGTKKARFKGKGWLNAQLSVIFFKLLEEHGIKTHFIGVAGGNRLIVEKLDMYPLEVVVRNVVAGSLKKRLPLPEGYELPEPIVELYYKNDELHDPMINYYHAKVLG-ISLDEIKKIEEIALKVNEILKDYLAKKGIILVDFKLEFGK--DKNGDIVLADEISPDTCRFWDAKTKRSLDKDVFRFDKGDLIEAYKEIYERITGEKP |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4O7R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -71129 for 1720 contacts (-41.4/contact) +
2D Compatibility (PS) -23804 + (NN) -3126 + (LL) 976
1D Compatibility (HY) -22800 + (ID) 5200
Total energy: -125083.0 ( -72.72 by residue)
QMean score : 0.369
|
|
|