Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFEWNTNNIIDATGGRGKSGCHNLNISTDTRNIKKGDLFIALKGKNFDGHDFLHEAFLKGAAAAVVSEDKYRNLPVIVVQDTLKALHDMASYYIRNVLVNAEVIAITGSVGKTTTKDMLHTVLSQYGV--SHVNDGNLNNNIGLPLTILKAPENCRYLILEMGMNKAGEIKELSKISNPNIAVITNIEPVHVENFSSLFD-IAQAKLEILYGVKNNGTLILNKDNKYYDYLLSHVDRDVVSFGRSESATVCLLNVIKNDKGLNLKIRLNNNQIMNCNLCVQGKHFVYSVLAVVAVIQNLGLNLSKLPLALENFNITKGR----GSVHKAKYNGK--CIHLIDDSYNASPASMKAAIRTLGI-YSNRRKVALLGDMLELGNKSI--TFH--MKLLDSIVKYDVDKVYTVGKFMLK------LHRLL--PGNIKGTHFNDSNQLKSNLANIVQNNDVVLVKGSRGVKMDFIVQGFIIEY |
| 4HV4 Chain:A ((125-468)) | -------------------------------------------------------------------------------------------------------IAVAGTHGKTTTTAMLSSIYAEAGLDPTFVN-GGLVKAAGTHARL----GSSRYLIAEADESDASFLH-----LQPMVAIVTNIEADHMDTYQGDFENLKQTFINFLHNLPFYGRAVMCIDDPVVRELLPRVGRHITTYGFSDDADVQIASYRQEGPQGHFTLRRQDKPLIEVTLNAPGRHNALNAAAAVAVATEEGIEDEDILRALVGFQGTGRRFDFLGNFPLAPVNGKEGSAMLVDD-YGHHPTEVDATIKAARAGWPDKRIVMLFQPHRYTRTRDLYDDFANVLSQVDVLLMLD---VYAAGEPPIPGADSRALCRTIRNRGKLDPILVPDSESAPEMLAQILNGEDLILVQGAGNIGKIARKLAEHKLQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HV4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -198168 for 2614 contacts (-75.8/contact) +
2D Compatibility (PS) -34880 + (NN) -12648 + (LL) 7240
1D Compatibility (HY) -15200 + (ID) 4450
Total energy: -258106.0 ( -98.74 by residue)
QMean score : 0.461
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