Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNINIFVFLALSFVTSFNSIQAQILYTWSQVIPDNKLSVRAIIDSNTCPVAYVDGKGVEMLNRSSINNGDHTETICEMIVETGAQNISIDGIQVPILPEKISRIAFIGDTGCRINALFQQECNSVDSWPFKKNLDSIALHEPDLIVHVGDYHYRKTKCRNAQKCGNIYGYNKEAWYADWFEPAKDIL-LQSSFLFVRGNHENCDRAY-EGWFRYLDSHPFSSEKCENFVPGWFLDIG--PMKFFIFDSSSGEDIFTTQSTIDAFEKQFDKLT--QDS--SDKPTWFLTHRPLWRSPKKEFLTLKSHGNLTQIEAFGDKFPNNVATIVSGHIHIAQILLMNNVPDQIIVGNGGALLHAQDQEPVYQNIEFSYSNGKNYLAHEIKNFFGFGFSILNLDNHEFTFYDQNNEEMYSAKLTEDFKLEIN |
| 3AV0 Chain:A ((18-226)) | --------------------------------------------------------------------------------------------------GSHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPV----------KALRI----AMQAFKKLHENNIKVYIVAGNHEMPRRLGEESPLALLKD--Y----VKILDGKDVINVNGEEIFICGTYYHK----------KSKREEMLDKLKNFESEAKNYKKKILMLHQGINPYIPLD---------YE-LEHFD---LPKFSYYALGHIHKRILERFN-DGILAYSGSTEIIYRNEYEDYKKEGKGFYLVDFSGNDLDISDIEKIDIECREFVEVNIKDKKSFNEAVNKIERCKNKPVVFGK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AV0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101880 for 1560 contacts (-65.3/contact) +
2D Compatibility (PS) -21362 + (NN) -5601 + (LL) 8364
1D Compatibility (HY) -5600 + (ID) 1650
Total energy: -127729.0 ( -81.88 by residue)
QMean score : 0.294
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