Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFIGNRNRNKVERAISEIRRGLPIIIYDKSNYLLVAAAETLEKDLFNQYGLISGKIYVILPSSKVTCISQNVEHSSKRLLINNFDELFHLVNCSKEDHTKELQRSKAIDECAITLLKSSELLPYALVVDVNFKDEYEMRGWCEKSDVIALDVLFINNFQQNQDIYEVCKTPLFLKQTQKVNIISYR--TCNGRKEHYAIIIGNPGKNSEPLVRVHSSCYTGDLLDSLSCDCRSQLHQAIQIMTDSGNGIILYLMQDGRGIGLTNKLRAYDMQRKYNLDTVDANRILGFEDDERSFAVAAEMLKKLGIKKIQLLTNNGRKLSELKNNGIEVTRCLPLIMERNKYNDSYIETKFSRLGHRLRTF |
4RL4 Chain:B ((19-192)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------GHMKRLEVSNQAKLPTQFGEFYIQCFREKGSNGSKDH--LVVFTPNFSQNPLVRLHSECLTGDALGSQKCDCGGALQMALERISKEG-GLVIYLRQEGRGIGLFNKVNAYALQDK-GYDTIQANEMIGF-DDERDYSVAGEILEYYRIKKMRLLTNNPKKIAALEKYA-EVTR-ESLIVC----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RL4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72450 for 1259 contacts (-57.5/contact) +
2D Compatibility (PS) -18946 + (NN) -9862 + (LL) 14324
1D Compatibility (HY) -15600 + (ID) 3700
Total energy: -106234.0 ( -84.38 by residue)
QMean score : 0.489
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