Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHVHKNVVEFFLNQELNISDPDKDGWTSLHYAVQRGCLEVVKFLARKGKSINVENAYGSKPVHRAASGGHKNVVEFFLIKE
4F6R Chain:D ((59-133))
---HLEIVEVLLKHGADVNAADKMGDTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYG
General information:
TITO was launched using:
RESULT:
Template:
4F6R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31487 for 556 contacts (-56.6/contact) +
2D Compatibility (PS) -8135 + (NN) -4783 + (LL) 444
1D Compatibility (HY) -6400 + (ID) 1450
Total energy: -51811.0 ( -93.19 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_4F6R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4F6R-query.scw
PDB file :
Tito_Scwrl_4F6R.pdb
: