Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVQATYASISLPGISSVEDVLEDARFGKLFILVDDENRENEGDLIVLAEKLKPEHVAFMVRYGTGIVFLAMTRLHMGRLGLEFMRRSNIDEKLTPHTAFTTSIDARYGIATGVSAHDRTHTILTAIDGKSTQDDIITPGHVFPIIANDGGVLARNGHTEASVEIAKLIGYNHAAVGCELVNDDGSMMRLPELLKFAEQHNIKLTTIDKLIRYIKKLS
3LQU Chain:A ((8-208))
-------SFGTP-FERVELALDALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVENNTSAY---GTGFTVTIEAAEGVTTGVSAADRVTTVRAAIKDGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDDGTMARAPECIAFAGQHNMAVVTIEDLVAYRQAH-
General information:
TITO was launched using:
RESULT:
Template:
3LQU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -128694 for 1726 contacts (-74.6/contact) +
2D Compatibility (PS) -21833 + (NN) -6472 + (LL) 1072
1D Compatibility (HY) -14000 + (ID) 4500
Total energy: -174427.0 ( -101.06 by residue)
QMean score : 0.388
(partial model without unconserved sides chains):
PDB file :
Tito_3LQU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LQU-query.scw
PDB file :
Tito_Scwrl_3LQU.pdb
: