Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIITIFGPPGSGKGTQSSLLIERYNLKLISVGDLLRNIISSGSELGKKIKDTVESGNLIQDGVICELLYDQLALMDDNFLFDGFPRNLNQAHFLTQILRERYNRDVDIVIELQLNDKVAIDRLKNRLVCLDCKSVYSTSSFKDDNNLVCTRCKSARLEKRIDDSDLSAIDRRIGEYHVQVKSLREYYRDK--LLMIDANLNVDQVKQEIESKISCSLV
4CF7 Chain:A ((1-198))
MILVFLGPPGAGKGTQAKRLAKEKGFVHISTGDILREAVQKGTPLGKKAKEYMERGELVPDDLIIALI-EEVFPKHGNVIFDGFPRTVKQAEALDEML-EKKGLKVDHVLLFEVPDEVVIERLSGRRINPETGEVYHVKY--------NPPPPGVKVIQREDDKP-EVIKKRLEVYREQTAPLIEYYKKKGILRIIDASKPVEEVYRQVLEVIG----
General information:
TITO was launched using:
RESULT:
Template:
4CF7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97726 for 1521 contacts (-64.3/contact) +
2D Compatibility (PS) -21013 + (NN) -6371 + (LL) 964
1D Compatibility (HY) -12000 + (ID) 3550
Total energy: -139696.0 ( -91.84 by residue)
QMean score : 0.530
(partial model without unconserved sides chains):
PDB file :
Tito_4CF7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CF7-query.scw
PDB file :
Tito_Scwrl_4CF7.pdb
: