Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKELYRDSIVKSLKDKFNYGNIMQVPKLVKVCINMGVGGAATDNKAINEPFDDLYLIAGQKPVSTFAKKSISGFKIRKGATVGCKVTLRRDKMYEFLERLIYVALPREKDFRGFSVKQFDGNGNFSFGIKEHISFLEIDYDKISKIRGMDINIVTSAASDKEAKELLLAFKFPFFD |
3J5L Chain:F ((4-176)) | -LHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLDNAAADLAAISGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFERLITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAKSDEEGRALLAAFDFPFR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J5L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 51933 for 1259 contacts (41.2/contact) +
2D Compatibility (PS) -17850 + (NN) 393 + (LL) 340
1D Compatibility (HY) 15600 + (ID) 450
Total energy: 49966.0 ( 39.69 by residue)
QMean score : 0.107
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