Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
TVDIADIRSKSSQELYEILVNLRKEFVNL-IFQKKLGQCNNISRFSLIRKSIARILTVLNERRIEGKSA
1KQS Chain:U ((5-62))
---VQEIRDMTPAEREAELDDLKTELLNARAVQAAGGAPENPGRIKELRKAIARIKTIQGEEGD-----
General information:
TITO was launched using:
RESULT:
Template:
1KQS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17268 for 304 contacts (-56.8/contact) +
2D Compatibility (PS) -6060 + (NN) -3528 + (LL) 504
1D Compatibility (HY) 0 + (ID) 950
Total energy: -27302.0 ( -89.81 by residue)
QMean score : 0.741
(partial model without unconserved sides chains):
PDB file :
Tito_1KQS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KQS-query.scw
PDB file :
Tito_Scwrl_1KQS.pdb
: