Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPKHYPDTISSPDFSSLEKEIIKFWQENKIFEQSV-EKRSKDNCFVFYDGPPFANGLPHYGHLLTGFIKDAFARYQTMLQKKVERRFGWDCHGLPAEMGAEKELGISGRTEIEKFGIEKFNNYCRTSVMKFSSEWEKYVNRQARWVDFHNDY-KTMDRSFMESVIWA---FKQLYDKGLVYESVRVVPYSWACETPLSNFETRLDTAYRKKT-----SKAVTVAFELLENPQQFKQKCKLLAWTTTPWTLPSN-LALAIGKDIEYCAVSVHSSVSFQHVTLESREKETWIPLSRTG-MTEEGTETVTEDNEVSLVNNEIYIFAEDYLEKFIGHCEQNNIPYENCNTKLKADDLAGLSYKPLFNYFKG----TKNAFRVFIADYVTGEDGTGVVHTAPGFGEEDFYLCQSHDI---PAICPIDNSGRFTAEVSDLTGIHVFDTNDAIIKKLKEQGNWFKTEQYIHNYPHCWRTDTPLIYRAMPSWYVAVTKFKERMIELNKRVNWIPTHIRDGQFGKWLERAHDWSISRNRFWGTPIPIWKSDNARYPRVDVYGSIAELERDFNVKVNDLHRPFIDSLTRPNPDDPT-GKSIMRRVP-----DVFDCWFESGSVPFAQVHYPFENKEWFESN-----FPADFITEYIAQTR------GWFYTLFVLSTALFDSEPFKNCICHGVVL-------------------------DVKGQ------------------KLSKRLNNYADPMEVFDKYGSDALRFLMLSGSIVCGGNLFLNKEGSSIRDVLKNVMKPIWNSYHFFTMYANADGIKAEVCKDYKSTIDSYMIFKCFEAVESIQASMSNYNSQEACKILIDFFEVLNNWYIRRSRERFWKSNLDQDKTDAYNVLYTVFYYILRAAVPLLPLITETIWQGLKYKEISVHLADFPQLERYDSELIAKMDLVREICNSALSIRNTFNIRVRQPLGSMTVYHQSSCSFLESKPLSVVIPKFSPVIPMRDTGTQKEKKWSNAEMKTSMNEYQEMIKDEVNVKELKLVNSLEGIASLELKLNFPMLGKRIPDKVKKLVQYVKEGKWKQVDNEQVFLGNESESYIIEKDEYELLLKTNSEYSSVFGDNKGIVILNTALDDALVLEGLARDVVRLIQEARKQADFHISDRIRVIIKTEDEKIKRAINTWGEYIREQTLSLSLEINIEIGDNFYSKEYQDLIVGIELNC |
| 4ARI Chain:A ((30-797)) | -----------------IESKVQLHWDEKRTFEVTEDESKEKYYCLSML---PYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAVK------------------NN---TAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLVYKKTSAV------------------------EIPQWFIKITAYADELLNDLD------KLDHWPDTVKTMQRNWIGRSEGVEITFNVNDYDNTLTVYTTRPDTFMGCTYLAVAAGHPLAQKAAENNPE------------------LAAFIDECR---------NT----------EKKGVDTGFKAVHPLTGEEIPVWAANFVLMEYGTGAVMAVPGHDQRDYEFASKYGLNIKPVILAADGS-----------------EPDLSQQALTEKGVLFNSGEF-----------NGLDHEAA---FNAIADKLTAMGVGERKVNY---------------RLRDWGVSRQRYWGAPIPMVTLED---------GTVMPTPDD-QLPVILPEDVVMDGITSPIKADPEWAKTTVNGMPALRETDTFDTFMES-SWYYARYTCPQYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFAS---PADMTLEWQESGVEGA-NRFLKRVWKLVYEHTAKGDVAALNVDALTENQKAL-RRDVHKTIAKVTDDIGRRQTFNTAIAA-----IMELMN---------KLAKAPTDGEQDRA--LMQEALLAVVRMLNPFTPHICFTLWQELKGEGDIDNAPWPVADEKAMVEDSTLVVVQVNGKVRAKITVPVDATEEQVRERAGQEHLVAKYLDGVTVRKVIYVPGKLLNLVVG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ARI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -234351 for 5150 contacts (-45.5/contact) +
2D Compatibility (PS) -67884 + (NN) -12592 + (LL) 25932
1D Compatibility (HY) -29200 + (ID) 9200
Total energy: -327295.0 ( -63.55 by residue)
QMean score : 0.265
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