Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSEKIELIFEKLKQSNPIPKIELSYTNHFTLLVAIVLSARTTDVSVNKITKELFSIANTPEKMLNLGQSELKKHISSIGLYNSKAKNIIELSRILVERHTSKVPTNFDDLVSLPGVGRKSANVFLNSGLGIPTLAVDTHVFRVSNKIGLVKEKDVFK--TEKSLLNVVPKKYLLYA-----HHWLVLHGRYVCKAQKPSCKTCIIHDLCEFECKRYKV
1RRS Chain:A ((38-218))
---------------------------DPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLEALADADEDEVLKAWEGLGYY-SRVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVNGNVMRVLSRLFLVTD-DIAKPSTRKRFEQIV-REIMAYENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQAFAEGVAE
General information:
TITO was launched using:
RESULT:
Template:
1RRS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95885 for 1305 contacts (-73.5/contact) +
2D Compatibility (PS) -17806 + (NN) -7390 + (LL) 1944
1D Compatibility (HY) -12400 + (ID) 2300
Total energy: -133837.0 ( -102.56 by residue)
QMean score : 0.423
(partial model without unconserved sides chains):
PDB file :
Tito_1RRS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RRS-query.scw
PDB file :
Tito_Scwrl_1RRS.pdb
: