Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTLVNILFIMIPLLFSVAYLVYFERKVIGAIQLRHGPSVVGPFGLLQPFADAIKLLVKEPIIPFRANTILFIMAPMLTFILALIVWAVIPFGAEVITENGQQIVIPKVIANVNIGVLYVLAISSLGIYGIIVAGWSSNSNYAFLGSIRSAAQMISYEVSMGLIVATVVITTGTLNLGEMVATKHSMPFWIDLLMMPIGVVFFISLLAETNRHPFDLPEAEAELVSGYNVEYSSMPFALFFLGEYANMILGSAMMTIFFLGGWYPPLKLSLLYKIPGLIWFVLKIVLLLFIFVWTRATIPRYRYDQLMRLGWKVFLPISVLWVILISGVLLFTGNLPGRGL----------------- |
| 4HE8 Chain:C ((2-354)) | ----------------TWSYPVD-------------PYWMVALKALLVVVGLLTAFAFMTLIERRLLARFLFVLAPLISVVFALLAFGLIPFGPP-GSFFGYQPWVI----NLDLGILYLFAVSELAVYGIFLSGWASGSKYSLLGSLRSSASLISYELGLGLALLAPVLLVGSLNLNDIVNWQKE-HGWLFLYAFPAFLVYLIASMAEAAR------------------TYSSIKWALFQMAEYIHFITASALIPTLFLGGWTMPVLE------VPYLWMFLKIAFFLFFFIWIRATWFRLRYDQLLRFGWGFLFPLALLWFLVTALVVAL--DLPRTYLLYLSALSFLVLLGAVLY |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4HE8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -270596 for 2213 contacts (-122.3/contact) +
2D Compatibility (PS) -29041 + (NN) -7539 + (LL) 5888
1D Compatibility (HY) -40400 + (ID) 5150
Total energy: -346838.0 ( -156.73 by residue)
QMean score : 0.237
|
|
|